Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.28□□□□□ -0.12
LHX2P50458 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LHX2P50458 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LHX2P50458 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.28□□□□□ -0.12
LHX2P50458 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 AC074338.1-201ENST00000416825 156 ntBASIC14.28□□□□□ -0.12
LHX2P50458 AC136604.1-201ENST00000418535 575 ntBASIC14.28□□□□□ -0.12
LHX2P50458 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 AL353779.1-201ENST00000434793 351 ntBASIC14.28□□□□□ -0.12
LHX2P50458 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.28□□□□□ -0.12
LHX2P50458 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.28□□□□□ -0.12
LHX2P50458 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.28□□□□□ -0.12
LHX2P50458 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.28□□□□□ -0.12
LHX2P50458 API5-211ENST00000534695 560 ntTSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 HNRNPUP1-201ENST00000554987 333 ntBASIC14.28□□□□□ -0.12
LHX2P50458 AC069224.1-201ENST00000566372 1715 ntBASIC14.28□□□□□ -0.12
LHX2P50458 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.28□□□□□ -0.12
LHX2P50458 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LHX2P50458 LINC01115-203ENST00000606068 577 ntBASIC14.28□□□□□ -0.12
LHX2P50458 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 AL662799.1-202ENST00000614205 422 ntBASIC14.28□□□□□ -0.12
LHX2P50458 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LHX2P50458 PCDHB19P-201ENST00000570871 2371 ntBASIC14.27□□□□□ -0.12
LHX2P50458 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LHX2P50458 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LHX2P50458 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LHX2P50458 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.27□□□□□ -0.13
LHX2P50458 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.27□□□□□ -0.13
LHX2P50458 RPL13P2-201ENST00000440687 659 ntBASIC14.27□□□□□ -0.13
LHX2P50458 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.27□□□□□ -0.13
LHX2P50458 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.27□□□□□ -0.13
LHX2P50458 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 TPRX2P-201ENST00000535362 881 ntBASIC14.27□□□□□ -0.13
LHX2P50458 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
LHX2P50458 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
LHX2P50458 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 AC023310.3-201ENST00000557027 670 ntBASIC14.27□□□□□ -0.13
LHX2P50458 AC100756.1-201ENST00000562736 682 ntBASIC14.27□□□□□ -0.13
LHX2P50458 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LHX2P50458 AC138749.3-201ENST00000567691 622 ntBASIC14.27□□□□□ -0.13
LHX2P50458 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.27□□□□□ -0.13
LHX2P50458 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.27□□□□□ -0.13
LHX2P50458 AC116165.1-201ENST00000611806 668 ntBASIC14.27□□□□□ -0.13
LHX2P50458 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.27□□□□□ -0.13
LHX2P50458 AF228730.6-201ENST00000641497 218 ntBASIC14.27□□□□□ -0.13
LHX2P50458 AC084121.3-201ENST00000641716 218 ntBASIC14.27□□□□□ -0.13
LHX2P50458 AC105233.6-201ENST00000642093 218 ntBASIC14.27□□□□□ -0.13
LHX2P50458 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.27□□□□□ -0.13
LHX2P50458 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.27□□□□□ -0.13
LHX2P50458 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LHX2P50458 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX2P50458 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.27□□□□□ -0.13
LHX2P50458 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LHX2P50458 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms