Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CX3CR1P49238 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AL591424.1-201ENST00000442569 1213 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 AC245100.5-201ENST00000452108 331 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AC002347.1-201ENST00000569543 541 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 AP002472.1-201ENST00000577490 586 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AC140113.2-201ENST00000604370 208 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 AC027601.4-201ENST00000611259 610 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 BX640515.1-201ENST00000617215 977 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CR1P49238 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CX3CR1P49238 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.17□□□□□ -0.14
CX3CR1P49238 KRT18P3-201ENST00000451602 1288 ntBASIC14.17□□□□□ -0.14
CX3CR1P49238 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
CX3CR1P49238 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.17□□□□□ -0.14
CX3CR1P49238 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CR1P49238 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CX3CR1P49238 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CX3CR1P49238 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CR1P49238 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CR1P49238 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CX3CR1P49238 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CR1P49238 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CR1P49238 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.16□□□□□ -0.14
CX3CR1P49238 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CX3CR1P49238 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms