Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BRCC3P46736 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17■□□□□ 0.31
BRCC3P46736 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
BRCC3P46736 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BRCC3P46736 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17■□□□□ 0.31
BRCC3P46736 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17■□□□□ 0.31
BRCC3P46736 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17■□□□□ 0.31
BRCC3P46736 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
BRCC3P46736 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BRCC3P46736 CDC14C-201ENST00000428251 1719 ntBASIC16.99■□□□□ 0.31
BRCC3P46736 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
BRCC3P46736 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.99■□□□□ 0.31
BRCC3P46736 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BRCC3P46736 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 U91328.1-201ENST00000437528 223 ntBASIC16.99■□□□□ 0.31
BRCC3P46736 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.99■□□□□ 0.31
BRCC3P46736 HNRNPUP1-201ENST00000554987 333 ntBASIC16.99■□□□□ 0.31
BRCC3P46736 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.99■□□□□ 0.31
BRCC3P46736 AL450472.2-201ENST00000603663 1156 ntBASIC16.99■□□□□ 0.31
BRCC3P46736 AL391069.4-201ENST00000609583 481 ntBASIC16.99■□□□□ 0.31
BRCC3P46736 AL158212.4-201ENST00000624062 1286 ntBASIC16.99■□□□□ 0.31
BRCC3P46736 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.99■□□□□ 0.31
BRCC3P46736 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BRCC3P46736 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BRCC3P46736 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRCC3P46736 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BRCC3P46736 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.98■□□□□ 0.31
BRCC3P46736 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BRCC3P46736 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.98■□□□□ 0.31
BRCC3P46736 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BRCC3P46736 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BRCC3P46736 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.98■□□□□ 0.31
BRCC3P46736 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.98■□□□□ 0.31
BRCC3P46736 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.98■□□□□ 0.31
BRCC3P46736 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BRCC3P46736 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms