Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.74■□□□□ 0.27
MMP13P45452 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP13P45452 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MMP13P45452 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 KRT18P13-201ENST00000400056 1290 ntBASIC16.73■□□□□ 0.27
MMP13P45452 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP13P45452 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 TIMM8BP1-201ENST00000452384 211 ntBASIC16.73■□□□□ 0.27
MMP13P45452 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP13P45452 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
MMP13P45452 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP13P45452 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
MMP13P45452 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP13P45452 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP13P45452 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP13P45452 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP13P45452 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.72■□□□□ 0.27
MMP13P45452 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP13P45452 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 AC079140.1-201ENST00000508039 487 ntBASIC16.72■□□□□ 0.27
MMP13P45452 KRT8P48-201ENST00000515599 1220 ntBASIC16.72■□□□□ 0.27
MMP13P45452 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 AC243562.1-201ENST00000560672 389 ntBASIC16.72■□□□□ 0.27
MMP13P45452 AL138918.1-201ENST00000568306 659 ntBASIC16.72■□□□□ 0.27
MMP13P45452 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MMP13P45452 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP13P45452 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP13P45452 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms