Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.52□□□□□ -0.08
APOBEC1P41238 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOBEC1P41238 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
APOBEC1P41238 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.52□□□□□ -0.09
APOBEC1P41238 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 CNN2P2-201ENST00000443536 909 ntBASIC14.52□□□□□ -0.09
APOBEC1P41238 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.52□□□□□ -0.09
APOBEC1P41238 CNN2P3-201ENST00000450201 906 ntBASIC14.52□□□□□ -0.09
APOBEC1P41238 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.52□□□□□ -0.09
APOBEC1P41238 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.52□□□□□ -0.09
APOBEC1P41238 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.52□□□□□ -0.09
APOBEC1P41238 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.52□□□□□ -0.09
APOBEC1P41238 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
APOBEC1P41238 AL136317.3-201ENST00000618497 906 ntBASIC14.52□□□□□ -0.09
APOBEC1P41238 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.52□□□□□ -0.09
APOBEC1P41238 AL596257.1-201ENST00000641463 2694 ntBASIC14.52□□□□□ -0.09
APOBEC1P41238 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
APOBEC1P41238 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
APOBEC1P41238 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOBEC1P41238 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.52□□□□□ -0.09
APOBEC1P41238 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOBEC1P41238 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
APOBEC1P41238 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 LINC02199-201ENST00000506655 2702 ntBASIC14.51□□□□□ -0.09
APOBEC1P41238 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
APOBEC1P41238 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOBEC1P41238 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
APOBEC1P41238 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 AP005117.1-202ENST00000581724 1908 ntBASIC14.51□□□□□ -0.09
APOBEC1P41238 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
APOBEC1P41238 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.51□□□□□ -0.09
APOBEC1P41238 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.51□□□□□ -0.09
APOBEC1P41238 EEF1DP4-201ENST00000446006 880 ntBASIC14.51□□□□□ -0.09
APOBEC1P41238 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.51□□□□□ -0.09
APOBEC1P41238 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.51□□□□□ -0.09
APOBEC1P41238 AC109322.1-201ENST00000524499 1264 ntBASIC14.51□□□□□ -0.09
APOBEC1P41238 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.51□□□□□ -0.09
APOBEC1P41238 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.51□□□□□ -0.09
APOBEC1P41238 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.51□□□□□ -0.09
APOBEC1P41238 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.51□□□□□ -0.09
APOBEC1P41238 AC006538.3-201ENST00000612495 578 ntBASIC14.51□□□□□ -0.09
APOBEC1P41238 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.51□□□□□ -0.09
APOBEC1P41238 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.51□□□□□ -0.09
APOBEC1P41238 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOBEC1P41238 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.51□□□□□ -0.09
APOBEC1P41238 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.51□□□□□ -0.09
APOBEC1P41238 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOBEC1P41238 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.5□□□□□ -0.09
APOBEC1P41238 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.5□□□□□ -0.09
APOBEC1P41238 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.5□□□□□ -0.09
APOBEC1P41238 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOBEC1P41238 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 AL139400.1-201ENST00000366220 510 ntBASIC14.5□□□□□ -0.09
APOBEC1P41238 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOBEC1P41238 SPDYE17-201ENST00000412399 783 ntBASIC14.5□□□□□ -0.09
APOBEC1P41238 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms