Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 AC011477.6-201ENST00000604980 1927 ntBASIC17.68■□□□□ 0.42
RFC5P40937 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC5P40937 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC5P40937 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC5P40937 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC5P40937 COX20P2-201ENST00000452636 358 ntBASIC17.67■□□□□ 0.42
RFC5P40937 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC5P40937 DOC2GP-202ENST00000514950 1163 ntBASIC17.67■□□□□ 0.42
RFC5P40937 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.67■□□□□ 0.42
RFC5P40937 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.67■□□□□ 0.42
RFC5P40937 AC190387.1-201ENST00000551683 408 ntBASIC17.67■□□□□ 0.42
RFC5P40937 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.67■□□□□ 0.42
RFC5P40937 AC092337.1-201ENST00000568699 1129 ntBASIC17.67■□□□□ 0.42
RFC5P40937 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RFC5P40937 SRD5A3P1-201ENST00000603021 949 ntBASIC17.67■□□□□ 0.42
RFC5P40937 AL450472.2-201ENST00000603663 1156 ntBASIC17.67■□□□□ 0.42
RFC5P40937 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.67■□□□□ 0.42
RFC5P40937 AL662844.4-201ENST00000606367 2838 ntBASIC17.67■□□□□ 0.42
RFC5P40937 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 CYP2T1P-202ENST00000641596 2535 ntBASIC17.67■□□□□ 0.42
RFC5P40937 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.67■□□□□ 0.42
RFC5P40937 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC5P40937 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC5P40937 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFC5P40937 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.66■□□□□ 0.42
RFC5P40937 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RFC5P40937 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.66■□□□□ 0.42
RFC5P40937 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 SPDYE18-201ENST00000510091 1050 ntBASIC17.66■□□□□ 0.42
RFC5P40937 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.66■□□□□ 0.42
RFC5P40937 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.66■□□□□ 0.42
RFC5P40937 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.66■□□□□ 0.42
RFC5P40937 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFC5P40937 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFC5P40937 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
RFC5P40937 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.65■□□□□ 0.42
RFC5P40937 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.65■□□□□ 0.42
RFC5P40937 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFC5P40937 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
RFC5P40937 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFC5P40937 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms