Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 AC006001.1-201ENST00000325130 474 ntBASIC19.96■□□□□ 0.79
RFC4P35249 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 KRT18P43-201ENST00000469825 1281 ntBASIC19.96■□□□□ 0.79
RFC4P35249 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 AC106872.11-201ENST00000605838 421 ntBASIC19.96■□□□□ 0.79
RFC4P35249 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.96■□□□□ 0.79
RFC4P35249 AL021578.1-201ENST00000613646 709 ntBASIC19.96■□□□□ 0.79
RFC4P35249 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 AC105020.1-201ENST00000435356 2205 ntBASIC19.96■□□□□ 0.79
RFC4P35249 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 UBALD1-205ENST00000590891 2641 ntBASIC19.96■□□□□ 0.79
RFC4P35249 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC4P35249 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RFC4P35249 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RFC4P35249 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 DRD5P1-201ENST00000456605 1438 ntBASIC19.95■□□□□ 0.78
RFC4P35249 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC4P35249 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFC4P35249 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 BTBD6P1-201ENST00000412176 1267 ntBASIC19.95■□□□□ 0.78
RFC4P35249 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.95■□□□□ 0.78
RFC4P35249 AP001582.1-201ENST00000525856 295 ntBASIC19.95■□□□□ 0.78
RFC4P35249 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.95■□□□□ 0.78
RFC4P35249 RN7SL190P-201ENST00000582519 257 ntBASIC19.95■□□□□ 0.78
RFC4P35249 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC4P35249 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC4P35249 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.95■□□□□ 0.78
RFC4P35249 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC4P35249 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.95■□□□□ 0.78
RFC4P35249 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC4P35249 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 REXO1L1P-202ENST00000608646 1974 ntBASIC19.95■□□□□ 0.78
RFC4P35249 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RFC4P35249 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
RFC4P35249 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
RFC4P35249 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC4P35249 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.95■□□□□ 0.78
RFC4P35249 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC4P35249 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC4P35249 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RFC4P35249 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 FAM197Y7-201ENST00000432892 766 ntBASIC19.94■□□□□ 0.78
RFC4P35249 AC007969.1-201ENST00000433675 447 ntBASIC19.94■□□□□ 0.78
RFC4P35249 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 HNRNPUP1-201ENST00000554987 333 ntBASIC19.94■□□□□ 0.78
RFC4P35249 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 AC244452.3-201ENST00000636814 210 ntBASIC19.94■□□□□ 0.78
RFC4P35249 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
RFC4P35249 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC4P35249 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms