Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.33■■□□□ 1.01
USP6P35125 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.33■■□□□ 1.01
USP6P35125 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.33■■□□□ 1.01
USP6P35125 C2orf69P2-201ENST00000562032 1123 ntBASIC21.33■■□□□ 1.01
USP6P35125 MIR4313-201ENST00000580760 101 ntBASIC21.33■■□□□ 1.01
USP6P35125 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.33■■□□□ 1.01
USP6P35125 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.33■■□□□ 1.01
USP6P35125 AL354718.3-201ENST00000616414 581 ntBASIC21.33■■□□□ 1.01
USP6P35125 CR382287.1-201ENST00000623954 586 ntBASIC21.33■■□□□ 1.01
USP6P35125 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
USP6P35125 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
USP6P35125 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
USP6P35125 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
USP6P35125 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.33■■□□□ 1
USP6P35125 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.33■■□□□ 1
USP6P35125 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP6P35125 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
USP6P35125 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.32■■□□□ 1
USP6P35125 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.32■■□□□ 1
USP6P35125 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.32■■□□□ 1
USP6P35125 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.32■■□□□ 1
USP6P35125 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
USP6P35125 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.32■■□□□ 1
USP6P35125 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.32■■□□□ 1
USP6P35125 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.32■■□□□ 1
USP6P35125 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.32■■□□□ 1
USP6P35125 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
USP6P35125 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP6P35125 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
USP6P35125 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
USP6P35125 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.31■■□□□ 1
USP6P35125 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.31■■□□□ 1
USP6P35125 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 FAM197Y7-201ENST00000432892 766 ntBASIC21.31■■□□□ 1
USP6P35125 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC21.31■■□□□ 1
USP6P35125 AC078819.1-201ENST00000547454 765 ntBASIC21.31■■□□□ 1
USP6P35125 AC012085.1-201ENST00000548270 765 ntBASIC21.31■■□□□ 1
USP6P35125 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.31■■□□□ 1
USP6P35125 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.31■■□□□ 1
USP6P35125 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.31■■□□□ 1
USP6P35125 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.31■■□□□ 1
USP6P35125 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
USP6P35125 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
USP6P35125 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
USP6P35125 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP6P35125 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
USP6P35125 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 AC006001.1-201ENST00000325130 474 ntBASIC21.3■■□□□ 1
USP6P35125 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.3■■□□□ 1
USP6P35125 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
USP6P35125 AC243960.2-201ENST00000600996 747 ntBASIC21.3■■□□□ 1
USP6P35125 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
USP6P35125 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 MTHFR-217ENST00000641820 1569 ntBASIC21.3■■□□□ 1
USP6P35125 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.3■■□□□ 1
USP6P35125 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
USP6P35125 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP6P35125 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 BCYRN1-201ENST00000418539 200 ntBASIC21.29■■□□□ 1
USP6P35125 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.29■■□□□ 1
USP6P35125 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.29■■□□□ 1
USP6P35125 AP005019.2-201ENST00000615104 511 ntBASIC21.29■■□□□ 1
USP6P35125 AC138951.2-201ENST00000623455 1161 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms