Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CASQ1P31415 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.33■□□□□ 0.36
CASQ1P31415 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CASQ1P31415 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.33■□□□□ 0.36
CASQ1P31415 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 AL122018.1-201ENST00000446607 2310 ntBASIC17.32■□□□□ 0.36
CASQ1P31415 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.32■□□□□ 0.36
CASQ1P31415 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CASQ1P31415 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.32■□□□□ 0.36
CASQ1P31415 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.32■□□□□ 0.36
CASQ1P31415 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 POM121L3P-201ENST00000419331 1163 ntBASIC17.32■□□□□ 0.36
CASQ1P31415 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.32■□□□□ 0.36
CASQ1P31415 SLC25A6P2-201ENST00000497974 877 ntBASIC17.32■□□□□ 0.36
CASQ1P31415 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.32■□□□□ 0.36
CASQ1P31415 AL136038.3-201ENST00000561909 1096 ntBASIC17.32■□□□□ 0.36
CASQ1P31415 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 LINC01023-201ENST00000606054 436 ntBASIC17.32■□□□□ 0.36
CASQ1P31415 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 PI4KAP1-204ENST00000612579 1703 ntBASIC17.32■□□□□ 0.36
CASQ1P31415 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASQ1P31415 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CASQ1P31415 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.32■□□□□ 0.36
CASQ1P31415 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.32■□□□□ 0.36
CASQ1P31415 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 AC011477.6-201ENST00000604980 1927 ntBASIC17.31■□□□□ 0.36
CASQ1P31415 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ1P31415 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.31■□□□□ 0.36
CASQ1P31415 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CASQ1P31415 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CASQ1P31415 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ1P31415 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.31■□□□□ 0.36
CASQ1P31415 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.31■□□□□ 0.36
CASQ1P31415 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.31■□□□□ 0.36
CASQ1P31415 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CASQ1P31415 AC063952.2-201ENST00000498792 1227 ntBASIC17.31■□□□□ 0.36
CASQ1P31415 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ1P31415 AL160237.2-201ENST00000556165 472 ntBASIC17.31■□□□□ 0.36
CASQ1P31415 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.31■□□□□ 0.36
CASQ1P31415 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ1P31415 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.31■□□□□ 0.36
CASQ1P31415 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.31■□□□□ 0.36
CASQ1P31415 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.31■□□□□ 0.36
CASQ1P31415 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.31■□□□□ 0.36
CASQ1P31415 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
CASQ1P31415 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASQ1P31415 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CASQ1P31415 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CASQ1P31415 AC016734.2-201ENST00000624325 1377 ntBASIC17.3■□□□□ 0.36
CASQ1P31415 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.3■□□□□ 0.36
CASQ1P31415 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASQ1P31415 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.3■□□□□ 0.36
CASQ1P31415 HCG4-201ENST00000418983 998 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms