Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.79□□□□□ -0.2
TNFSF4P23510 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.79□□□□□ -0.2
TNFSF4P23510 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.79□□□□□ -0.2
TNFSF4P23510 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 AL139010.1-201ENST00000454878 894 ntBASIC13.79□□□□□ -0.2
TNFSF4P23510 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.79□□□□□ -0.2
TNFSF4P23510 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.79□□□□□ -0.2
TNFSF4P23510 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.79□□□□□ -0.2
TNFSF4P23510 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.79□□□□□ -0.2
TNFSF4P23510 AC015911.4-201ENST00000588022 1070 ntBASIC13.79□□□□□ -0.2
TNFSF4P23510 AC007967.4-201ENST00000614700 386 ntBASIC13.79□□□□□ -0.2
TNFSF4P23510 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TNFSF4P23510 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.79□□□□□ -0.2
TNFSF4P23510 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TNFSF4P23510 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
TNFSF4P23510 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFSF4P23510 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.78□□□□□ -0.2
TNFSF4P23510 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFSF4P23510 AC107890.1-201ENST00000422478 521 ntBASIC13.78□□□□□ -0.2
TNFSF4P23510 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 KLF2P3-201ENST00000451977 1087 ntBASIC13.78□□□□□ -0.2
TNFSF4P23510 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.78□□□□□ -0.2
TNFSF4P23510 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.78□□□□□ -0.2
TNFSF4P23510 AC061975.2-201ENST00000581722 295 ntBASIC13.78□□□□□ -0.2
TNFSF4P23510 MIR4453-201ENST00000584019 89 ntBASIC13.78□□□□□ -0.2
TNFSF4P23510 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFSF4P23510 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TNFSF4P23510 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.78□□□□□ -0.2
TNFSF4P23510 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TNFSF4P23510 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TNFSF4P23510 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TNFSF4P23510 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms