Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
CD58P19256 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD58P19256 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.27■□□□□ 0.36
CD58P19256 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD58P19256 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.27■□□□□ 0.36
CD58P19256 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD58P19256 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.27■□□□□ 0.35
CD58P19256 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.27■□□□□ 0.35
CD58P19256 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CD58P19256 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CD58P19256 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD58P19256 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CD58P19256 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.26■□□□□ 0.35
CD58P19256 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.26■□□□□ 0.35
CD58P19256 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.26■□□□□ 0.35
CD58P19256 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.26■□□□□ 0.35
CD58P19256 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.26■□□□□ 0.35
CD58P19256 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.26■□□□□ 0.35
CD58P19256 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.26■□□□□ 0.35
CD58P19256 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 MTND6P24-201ENST00000440466 518 ntBASIC17.26■□□□□ 0.35
CD58P19256 BANF1P1-201ENST00000553684 263 ntBASIC17.26■□□□□ 0.35
CD58P19256 AC105021.1-202ENST00000570572 669 ntBASIC17.26■□□□□ 0.35
CD58P19256 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.26■□□□□ 0.35
CD58P19256 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.26■□□□□ 0.35
CD58P19256 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CD58P19256 PRAL-201ENST00000624952 3286 ntBASIC17.26■□□□□ 0.35
CD58P19256 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CD58P19256 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 AL162727.3-201ENST00000635661 2787 ntBASIC17.26■□□□□ 0.35
CD58P19256 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
CD58P19256 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD58P19256 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.25■□□□□ 0.35
CD58P19256 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.25■□□□□ 0.35
CD58P19256 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.25■□□□□ 0.35
CD58P19256 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CD58P19256 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 AC069224.1-201ENST00000566372 1715 ntBASIC17.25■□□□□ 0.35
CD58P19256 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 CNN2P2-201ENST00000443536 909 ntBASIC17.25■□□□□ 0.35
CD58P19256 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.25■□□□□ 0.35
CD58P19256 CNN2P3-201ENST00000450201 906 ntBASIC17.25■□□□□ 0.35
CD58P19256 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.25■□□□□ 0.35
CD58P19256 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.25■□□□□ 0.35
CD58P19256 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.25■□□□□ 0.35
CD58P19256 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.25■□□□□ 0.35
CD58P19256 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.25■□□□□ 0.35
CD58P19256 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.25■□□□□ 0.35
CD58P19256 AL136317.3-201ENST00000618497 906 ntBASIC17.25■□□□□ 0.35
CD58P19256 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.25■□□□□ 0.35
CD58P19256 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.25■□□□□ 0.35
CD58P19256 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD58P19256 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CD58P19256 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD58P19256 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms