Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 POLD2P1-201ENST00000511220 997 ntBASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 AC091812.2-201ENST00000619081 385 ntBASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 AL589702.1-201ENST00000641229 1509 ntBASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 HAUS4P1-201ENST00000406739 1145 ntBASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 FAM58CP-201ENST00000435741 640 ntBASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 RARRES2P8-201ENST00000566335 367 ntBASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 AL138918.1-201ENST00000568306 659 ntBASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
IGHV3-43DP0DP04 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
IGHV3-43DP0DP04 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
IGHV3-43DP0DP04 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 AL022342.1-201ENST00000400363 863 ntBASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
IGHV3-43DP0DP04 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms