Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 KRT8P39-201ENST00000396270 1433 ntBASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 AC100757.3-201ENST00000622361 1406 ntBASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNYL3P0C7X3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCNYL3P0C7X3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AC098859.1-201ENST00000502915 1238 ntBASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AC009118.2-201ENST00000613275 655 ntBASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AL590560.3-201ENST00000623350 461 ntBASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 AC063926.2-201ENST00000623766 1308 ntBASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL3P0C7X3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 AC073439.1-201ENST00000624121 1774 ntBASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL3P0C7X3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms