Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.07■□□□□ 0.64
COL1A1P02452 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.07■□□□□ 0.64
COL1A1P02452 ACTBP11-201ENST00000436287 1126 ntBASIC19.07■□□□□ 0.64
COL1A1P02452 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.07■□□□□ 0.64
COL1A1P02452 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.07■□□□□ 0.64
COL1A1P02452 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.07■□□□□ 0.64
COL1A1P02452 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 CU634019.7-201ENST00000624153 1185 ntBASIC19.07■□□□□ 0.64
COL1A1P02452 FP236241.2-201ENST00000624906 1185 ntBASIC19.07■□□□□ 0.64
COL1A1P02452 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.07■□□□□ 0.64
COL1A1P02452 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.07■□□□□ 0.64
COL1A1P02452 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL1A1P02452 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
COL1A1P02452 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL1A1P02452 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.06■□□□□ 0.64
COL1A1P02452 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.06■□□□□ 0.64
COL1A1P02452 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL1A1P02452 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.06■□□□□ 0.64
COL1A1P02452 CTBP2P5-201ENST00000454986 1264 ntBASIC19.06■□□□□ 0.64
COL1A1P02452 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.06■□□□□ 0.64
COL1A1P02452 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.06■□□□□ 0.64
COL1A1P02452 AC005252.2-201ENST00000624630 1141 ntBASIC19.06■□□□□ 0.64
COL1A1P02452 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.06■□□□□ 0.64
COL1A1P02452 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
COL1A1P02452 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL1A1P02452 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL1A1P02452 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL1A1P02452 LINC02447-202ENST00000501888 2146 ntBASIC19.06■□□□□ 0.64
COL1A1P02452 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL1A1P02452 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL1A1P02452 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL1A1P02452 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL1A1P02452 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.05■□□□□ 0.64
COL1A1P02452 KLF2P4-201ENST00000451959 1225 ntBASIC19.05■□□□□ 0.64
COL1A1P02452 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.05■□□□□ 0.64
COL1A1P02452 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.05■□□□□ 0.64
COL1A1P02452 AC015910.1-201ENST00000579400 975 ntBASIC19.05■□□□□ 0.64
COL1A1P02452 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.05■□□□□ 0.64
COL1A1P02452 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL1A1P02452 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL1A1P02452 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL1A1P02452 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL1A1P02452 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 AC024909.3-201ENST00000611513 2257 ntBASIC19.05■□□□□ 0.64
COL1A1P02452 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.05■□□□□ 0.64
COL1A1P02452 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL1A1P02452 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL1A1P02452 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL1A1P02452 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.04■□□□□ 0.64
COL1A1P02452 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
COL1A1P02452 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
COL1A1P02452 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.04■□□□□ 0.64
COL1A1P02452 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
COL1A1P02452 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.04■□□□□ 0.64
COL1A1P02452 AC245100.3-201ENST00000441281 285 ntBASIC19.04■□□□□ 0.64
COL1A1P02452 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.04■□□□□ 0.64
COL1A1P02452 RNA5SP412-201ENST00000516234 123 ntBASIC19.04■□□□□ 0.64
COL1A1P02452 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COL1A1P02452 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.04■□□□□ 0.64
COL1A1P02452 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL1A1P02452 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.04■□□□□ 0.64
COL1A1P02452 CLUHP6-201ENST00000580789 941 ntBASIC19.04■□□□□ 0.64
COL1A1P02452 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.04■□□□□ 0.64
COL1A1P02452 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
COL1A1P02452 AL022328.1-201ENST00000610050 478 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms