Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 AC112504.1-201ENST00000623415 1841 ntBASIC14.5□□□□□ -0.09
HLA-DQA2P01906 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 AC069224.1-201ENST00000566372 1715 ntBASIC14.5□□□□□ -0.09
HLA-DQA2P01906 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 IGHV3-22-201ENST00000520721 359 ntBASIC14.5□□□□□ -0.09
HLA-DQA2P01906 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 AL009183.1-201ENST00000603760 355 ntBASIC14.5□□□□□ -0.09
HLA-DQA2P01906 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 AC092919.2-201ENST00000623631 1645 ntBASIC14.5□□□□□ -0.09
HLA-DQA2P01906 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA2P01906 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 BCAR1-209ENST00000546196 1340 ntBASIC14.49□□□□□ -0.09
HLA-DQA2P01906 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 AC079776.4-201ENST00000511039 504 ntBASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA2P01906 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms