Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNOT4O95628 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNOT4O95628 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNOT4O95628 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNOT4O95628 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNOT4O95628 AL513477.1-201ENST00000602865 2407 ntBASIC14.33□□□□□ -0.12
CNOT4O95628 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CNOT4O95628 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 TSPY16P-201ENST00000449843 468 ntBASIC14.33□□□□□ -0.12
CNOT4O95628 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.33□□□□□ -0.12
CNOT4O95628 AC012645.4-201ENST00000610691 1061 ntBASIC14.33□□□□□ -0.12
CNOT4O95628 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CNOT4O95628 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.33□□□□□ -0.12
CNOT4O95628 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNOT4O95628 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 TSPY26P-202ENST00000565928 3884 ntBASIC14.32□□□□□ -0.12
CNOT4O95628 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.32□□□□□ -0.12
CNOT4O95628 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 AC002472.2-201ENST00000442739 958 ntBASIC14.32□□□□□ -0.12
CNOT4O95628 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 HLA-V-204ENST00000476601 1289 ntBASIC14.32□□□□□ -0.12
CNOT4O95628 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.32□□□□□ -0.12
CNOT4O95628 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.32□□□□□ -0.12
CNOT4O95628 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CNOT4O95628 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
CNOT4O95628 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNOT4O95628 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CNOT4O95628 DOC2GP-204ENST00000639052 2548 ntBASIC14.32□□□□□ -0.12
CNOT4O95628 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNOT4O95628 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms