Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 AC087386.2-201ENST00000623212 4637 ntBASIC13.51□□□□□ -0.25
SIX6O95475 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SIX6O95475 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
SIX6O95475 AL441883.1-201ENST00000566170 1045 ntBASIC13.51□□□□□ -0.25
SIX6O95475 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SIX6O95475 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
SIX6O95475 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SIX6O95475 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
SIX6O95475 AL122018.1-201ENST00000446607 2310 ntBASIC13.5□□□□□ -0.25
SIX6O95475 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SIX6O95475 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.5□□□□□ -0.25
SIX6O95475 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.5□□□□□ -0.25
SIX6O95475 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.5□□□□□ -0.25
SIX6O95475 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.5□□□□□ -0.25
SIX6O95475 GUSBP12-201ENST00000513727 720 ntBASIC13.5□□□□□ -0.25
SIX6O95475 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.5□□□□□ -0.25
SIX6O95475 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.5□□□□□ -0.25
SIX6O95475 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.5□□□□□ -0.25
SIX6O95475 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SIX6O95475 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.5□□□□□ -0.25
SIX6O95475 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms