Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG5O95196 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CSPG5O95196 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
CSPG5O95196 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.24■□□□□ 0.35
CSPG5O95196 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CSPG5O95196 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CSPG5O95196 AL031731.1-201ENST00000642131 2094 ntBASIC17.24■□□□□ 0.35
CSPG5O95196 AL118508.1-201ENST00000613502 2345 ntBASIC17.24■□□□□ 0.35
CSPG5O95196 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 MEP1AP4-201ENST00000423244 1087 ntBASIC17.24■□□□□ 0.35
CSPG5O95196 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.24■□□□□ 0.35
CSPG5O95196 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 TIMM17BP1-201ENST00000545713 516 ntBASIC17.24■□□□□ 0.35
CSPG5O95196 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.24■□□□□ 0.35
CSPG5O95196 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 AP005482.1-201ENST00000563722 1273 ntBASIC17.24■□□□□ 0.35
CSPG5O95196 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.24■□□□□ 0.35
CSPG5O95196 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.24■□□□□ 0.35
CSPG5O95196 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 AC018665.1-201ENST00000622927 1362 ntBASIC17.24■□□□□ 0.35
CSPG5O95196 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.24■□□□□ 0.35
CSPG5O95196 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG5O95196 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.23■□□□□ 0.35
CSPG5O95196 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CSPG5O95196 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSPG5O95196 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CSPG5O95196 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.23■□□□□ 0.35
CSPG5O95196 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.23■□□□□ 0.35
CSPG5O95196 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 AC104596.2-201ENST00000512793 793 ntBASIC17.23■□□□□ 0.35
CSPG5O95196 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.23■□□□□ 0.35
CSPG5O95196 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.23■□□□□ 0.35
CSPG5O95196 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSPG5O95196 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CSPG5O95196 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSPG5O95196 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSPG5O95196 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.22■□□□□ 0.35
CSPG5O95196 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 AC060834.1-201ENST00000443027 2032 ntBASIC17.22■□□□□ 0.35
CSPG5O95196 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CSPG5O95196 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms