Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.22□□□□□ -0.13
KDM4BO94953 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 LINC01144-201ENST00000626198 1710 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KDM4BO94953 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 AC138035.3-201ENST00000622706 2791 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 AL353732.1-201ENST00000569618 1459 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.21□□□□□ -0.13
KDM4BO94953 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
KDM4BO94953 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 AC073621.1-201ENST00000392730 636 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.21□□□□□ -0.13
KDM4BO94953 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.21□□□□□ -0.13
KDM4BO94953 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.21□□□□□ -0.13
KDM4BO94953 AC073648.2-201ENST00000510116 352 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.21□□□□□ -0.13
KDM4BO94953 OR7E14P-202ENST00000530490 1290 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.21□□□□□ -0.13
KDM4BO94953 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.21□□□□□ -0.13
KDM4BO94953 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
KDM4BO94953 AC012313.10-201ENST00000623509 926 ntBASIC14.21□□□□□ -0.13
KDM4BO94953 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KDM4BO94953 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KDM4BO94953 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KDM4BO94953 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.21□□□□□ -0.13
KDM4BO94953 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.21□□□□□ -0.14
KDM4BO94953 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.21□□□□□ -0.14
KDM4BO94953 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KDM4BO94953 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.2□□□□□ -0.14
KDM4BO94953 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.2□□□□□ -0.14
KDM4BO94953 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KDM4BO94953 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.2□□□□□ -0.14
KDM4BO94953 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.2□□□□□ -0.14
KDM4BO94953 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
KDM4BO94953 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.2□□□□□ -0.14
KDM4BO94953 GPAA1P2-202ENST00000606848 1787 ntBASIC14.2□□□□□ -0.14
KDM4BO94953 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KDM4BO94953 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.2□□□□□ -0.14
KDM4BO94953 RPS2P1-201ENST00000434010 821 ntBASIC14.2□□□□□ -0.14
KDM4BO94953 AC136632.2-201ENST00000512891 861 ntBASIC14.2□□□□□ -0.14
KDM4BO94953 AC107918.2-201ENST00000530817 355 ntBASIC14.2□□□□□ -0.14
KDM4BO94953 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.2□□□□□ -0.14
KDM4BO94953 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.2□□□□□ -0.14
KDM4BO94953 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KDM4BO94953 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 AC069224.1-201ENST00000566372 1715 ntBASIC14.2□□□□□ -0.14
KDM4BO94953 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.2□□□□□ -0.14
KDM4BO94953 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.2□□□□□ -0.14
KDM4BO94953 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KDM4BO94953 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.2□□□□□ -0.14
KDM4BO94953 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms