Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.18■□□□□ 0.18
GPC4O75487 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GPC4O75487 OR2I1P-209ENST00000641730 5365 ntBASIC16.18■□□□□ 0.18
GPC4O75487 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 AL671277.1-201ENST00000429656 993 ntBASIC16.18■□□□□ 0.18
GPC4O75487 ALG1L5P-201ENST00000482043 771 ntBASIC16.18■□□□□ 0.18
GPC4O75487 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
GPC4O75487 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.18■□□□□ 0.18
GPC4O75487 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GPC4O75487 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
GPC4O75487 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GPC4O75487 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 AC010491.1-201ENST00000563101 2797 ntBASIC16.18■□□□□ 0.18
GPC4O75487 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
GPC4O75487 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.18■□□□□ 0.18
GPC4O75487 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC4O75487 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC4O75487 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC4O75487 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.17■□□□□ 0.18
GPC4O75487 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GPC4O75487 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.17■□□□□ 0.18
GPC4O75487 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
GPC4O75487 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.17■□□□□ 0.18
GPC4O75487 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GPC4O75487 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
GPC4O75487 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GPC4O75487 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC4O75487 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.16■□□□□ 0.18
GPC4O75487 MYO15B-237ENST00000642007 4893 ntBASIC16.16■□□□□ 0.18
GPC4O75487 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC4O75487 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC4O75487 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC4O75487 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC4O75487 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 RPSAP43-201ENST00000402237 625 ntBASIC16.16■□□□□ 0.18
GPC4O75487 BX842568.4-201ENST00000421222 227 ntBASIC16.16■□□□□ 0.18
GPC4O75487 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 YBX1P5-201ENST00000509441 847 ntBASIC16.16■□□□□ 0.18
GPC4O75487 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 803.1 ms