Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USH2AO75445 MIR6816-201ENST00000620368 66 ntBASIC7□□□□□ -1.29
USH2AO75445 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC7□□□□□ -1.29
USH2AO75445 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
USH2AO75445 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
USH2AO75445 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
USH2AO75445 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 NOC2LP1-201ENST00000450578 752 ntBASIC7□□□□□ -1.29
USH2AO75445 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 SYT17-208ENST00000568433 812 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 MBP-238ENST00000580402 915 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USH2AO75445 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USH2AO75445 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 CAP2P1-201ENST00000557743 1390 ntBASIC7□□□□□ -1.29
USH2AO75445 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
USH2AO75445 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 AP001582.1-201ENST00000525856 295 ntBASIC7□□□□□ -1.29
USH2AO75445 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 NAT9-211ENST00000580632 799 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 BNIP3P13-201ENST00000599968 566 ntBASIC7□□□□□ -1.29
USH2AO75445 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 ENPP7P8-202ENST00000527856 1345 ntBASIC7□□□□□ -1.29
USH2AO75445 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 RN7SL396P-201ENST00000471086 295 ntBASIC6.99□□□□□ -1.29
USH2AO75445 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 AC004686.1-201ENST00000605113 538 ntBASIC6.99□□□□□ -1.29
USH2AO75445 NAMA-206ENST00000605377 509 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 CTSL-202ENST00000342020 933 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 MIR4783-201ENST00000580343 82 ntBASIC6.99□□□□□ -1.29
USH2AO75445 MIR4754-201ENST00000582477 89 ntBASIC6.99□□□□□ -1.29
USH2AO75445 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 OS9-205ENST00000413095 1660 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 AL139384.1-201ENST00000612143 3047 ntBASIC6.99□□□□□ -1.29
USH2AO75445 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 AC136604.1-201ENST00000418535 575 ntBASIC6.99□□□□□ -1.29
USH2AO75445 AL008707.1-201ENST00000422498 534 ntBASIC6.99□□□□□ -1.29
USH2AO75445 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC6.99□□□□□ -1.29
USH2AO75445 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC6.99□□□□□ -1.29
USH2AO75445 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC6.99□□□□□ -1.29
USH2AO75445 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms