Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.54■□□□□ 0.08
SEC22BO75396 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 AC074386.1-202ENST00000463561 864 ntBASIC15.54■□□□□ 0.08
SEC22BO75396 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 MIR4321-201ENST00000592276 80 ntBASIC15.54■□□□□ 0.08
SEC22BO75396 AC068137.2-201ENST00000605408 478 ntBASIC15.54■□□□□ 0.08
SEC22BO75396 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
SEC22BO75396 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
SEC22BO75396 AC022532.1-201ENST00000624563 1728 ntBASIC15.54■□□□□ 0.08
SEC22BO75396 AL161772.1-201ENST00000610494 4412 ntBASIC15.54■□□□□ 0.08
SEC22BO75396 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC22BO75396 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.53■□□□□ 0.08
SEC22BO75396 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC22BO75396 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SEC22BO75396 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC22BO75396 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.53■□□□□ 0.08
SEC22BO75396 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SEC22BO75396 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC22BO75396 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC22BO75396 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC22BO75396 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC22BO75396 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SEC22BO75396 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC22BO75396 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 AC023824.1-201ENST00000562945 2975 ntBASIC15.53■□□□□ 0.08
SEC22BO75396 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SEC22BO75396 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC22BO75396 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.52■□□□□ 0.08
SEC22BO75396 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SEC22BO75396 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.52■□□□□ 0.08
SEC22BO75396 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.52■□□□□ 0.08
SEC22BO75396 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SEC22BO75396 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.52■□□□□ 0.08
SEC22BO75396 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.52■□□□□ 0.08
SEC22BO75396 AC002056.1-201ENST00000395613 760 ntBASIC15.52■□□□□ 0.08
SEC22BO75396 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SEC22BO75396 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.52■□□□□ 0.08
SEC22BO75396 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.52■□□□□ 0.08
SEC22BO75396 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.52■□□□□ 0.08
SEC22BO75396 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SEC22BO75396 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.52■□□□□ 0.08
SEC22BO75396 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC22BO75396 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms