Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.06■□□□□ 0
TRIM3O75382 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.06■□□□□ 0
TRIM3O75382 AC105233.2-201ENST00000523697 349 ntBASIC15.06■□□□□ 0
TRIM3O75382 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 AF228730.5-201ENST00000530288 346 ntBASIC15.06■□□□□ 0
TRIM3O75382 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.06■□□□□ 0
TRIM3O75382 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.06■□□□□ 0
TRIM3O75382 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.06■□□□□ 0
TRIM3O75382 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.06■□□□□ 0
TRIM3O75382 PAUPAR-201ENST00000630360 2965 ntBASIC15.06■□□□□ 0
TRIM3O75382 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM3O75382 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.06■□□□□ 0
TRIM3O75382 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
TRIM3O75382 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.06■□□□□ 0
TRIM3O75382 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM3O75382 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRIM3O75382 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM3O75382 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM3O75382 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRIM3O75382 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM3O75382 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM3O75382 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.05■□□□□ -0
TRIM3O75382 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 AL645939.2-201ENST00000427340 991 ntBASIC15.05■□□□□ -0
TRIM3O75382 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.05■□□□□ -0
TRIM3O75382 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.05■□□□□ -0
TRIM3O75382 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.05■□□□□ -0
TRIM3O75382 PRYP6-201ENST00000514804 343 ntBASIC15.05■□□□□ -0
TRIM3O75382 SLC25A39P2-201ENST00000537614 270 ntBASIC15.05■□□□□ -0
TRIM3O75382 AC004449.1-201ENST00000564240 433 ntBASIC15.05■□□□□ -0
TRIM3O75382 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 AC020765.3-201ENST00000613051 740 ntBASIC15.05■□□□□ -0
TRIM3O75382 AC093028.1-201ENST00000622998 982 ntBASIC15.05■□□□□ -0
TRIM3O75382 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.05■□□□□ -0
TRIM3O75382 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.05■□□□□ -0
TRIM3O75382 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.05■□□□□ -0
TRIM3O75382 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM3O75382 GPAA1P2-202ENST00000606848 1787 ntBASIC15.05■□□□□ -0
TRIM3O75382 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM3O75382 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.05■□□□□ -0
TRIM3O75382 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM3O75382 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.04■□□□□ -0
TRIM3O75382 GGT4P-201ENST00000623672 1708 ntBASIC15.04■□□□□ -0
TRIM3O75382 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM3O75382 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 AC142381.1-201ENST00000426099 345 ntBASIC15.04■□□□□ -0
TRIM3O75382 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.04■□□□□ -0
TRIM3O75382 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 AL512356.2-201ENST00000546955 174 ntBASIC15.04■□□□□ -0
TRIM3O75382 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 AC025678.2-201ENST00000562061 970 ntBASIC15.04■□□□□ -0
TRIM3O75382 AC027796.2-201ENST00000575326 344 ntBASIC15.04■□□□□ -0
TRIM3O75382 AP001059.3-201ENST00000619053 235 ntBASIC15.04■□□□□ -0
TRIM3O75382 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.04■□□□□ -0
TRIM3O75382 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.04■□□□□ -0
TRIM3O75382 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms