Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1FO60840 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1FO60840 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CACNA1FO60840 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CACNA1FO60840 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.87■□□□□ 0.77
CACNA1FO60840 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1FO60840 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.87■□□□□ 0.77
CACNA1FO60840 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CACNA1FO60840 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1FO60840 AC026410.3-201ENST00000514280 936 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 TMBIM7P-203ENST00000641617 1718 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 AC105233.6-201ENST00000642093 218 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 AC112693.3-201ENST00000624819 1983 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1FO60840 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1FO60840 GIMAP3P-201ENST00000495150 836 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 AC104596.2-201ENST00000512793 793 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1FO60840 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1FO60840 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 AL035252.4-201ENST00000624174 288 ntBASIC19.86■□□□□ 0.77
CACNA1FO60840 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1FO60840 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1FO60840 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
CACNA1FO60840 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1FO60840 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.85■□□□□ 0.77
CACNA1FO60840 TMEM14DP-201ENST00000422205 345 ntBASIC19.85■□□□□ 0.77
CACNA1FO60840 AC134915.1-201ENST00000426461 574 ntBASIC19.85■□□□□ 0.77
CACNA1FO60840 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA1FO60840 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.85■□□□□ 0.77
CACNA1FO60840 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA1FO60840 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA1FO60840 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA1FO60840 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CACNA1FO60840 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CACNA1FO60840 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CACNA1FO60840 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1FO60840 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.85■□□□□ 0.77
CACNA1FO60840 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1FO60840 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.84■□□□□ 0.77
CACNA1FO60840 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.84■□□□□ 0.77
CACNA1FO60840 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CACNA1FO60840 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 AC079776.1-201ENST00000401540 1152 ntBASIC19.84■□□□□ 0.77
CACNA1FO60840 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1FO60840 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CACNA1FO60840 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1FO60840 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1FO60840 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms