Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AP005117.1-202ENST00000581724 1908 ntBASIC16.23■□□□□ 0.19
PRAMEF11O60813 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC136604.1-201ENST00000418535 575 ntBASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC009477.1-201ENST00000452936 217 ntBASIC16.23■□□□□ 0.19
PRAMEF11O60813 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC004890.2-204ENST00000481968 304 ntBASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 AC097359.3-201ENST00000603982 1210 ntBASIC16.23■□□□□ 0.19
PRAMEF11O60813 AL355385.1-201ENST00000606123 409 ntBASIC16.23■□□□□ 0.19
PRAMEF11O60813 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF11O60813 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF11O60813 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 MIR4313-201ENST00000580760 101 ntBASIC16.22■□□□□ 0.19
PRAMEF11O60813 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC025048.3-201ENST00000590609 569 ntBASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC005702.4-201ENST00000618393 416 ntBASIC16.22■□□□□ 0.19
PRAMEF11O60813 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF11O60813 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF11O60813 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms