Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 AC087499.5-201ENST00000452760 1342 ntBASIC18.05■□□□□ 0.48
CHMP2AO43633 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 MRPS18AP1-201ENST00000414458 589 ntBASIC18.05■□□□□ 0.48
CHMP2AO43633 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2AO43633 TSPY16P-201ENST00000449843 468 ntBASIC18.05■□□□□ 0.48
CHMP2AO43633 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2AO43633 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2AO43633 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2AO43633 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CHMP2AO43633 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHMP2AO43633 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHMP2AO43633 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2AO43633 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHMP2AO43633 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHMP2AO43633 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 MIR661-201ENST00000384842 89 ntBASIC18.04■□□□□ 0.48
CHMP2AO43633 AC004987.2-201ENST00000395959 1148 ntBASIC18.04■□□□□ 0.48
CHMP2AO43633 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP2AO43633 SERBP1P3-201ENST00000459980 809 ntBASIC18.04■□□□□ 0.48
CHMP2AO43633 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 AC010336.2-201ENST00000564226 506 ntBASIC18.04■□□□□ 0.48
CHMP2AO43633 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2AO43633 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2AO43633 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2AO43633 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP2AO43633 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP2AO43633 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 CYP2T1P-202ENST00000641596 2535 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHMP2AO43633 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP2AO43633 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 MIR648-201ENST00000385046 94 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMP2AO43633 AC236430.1-201ENST00000402231 743 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMP2AO43633 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP2AO43633 AC009477.1-201ENST00000452936 217 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CHMP2AO43633 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP2AO43633 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2AO43633 AC008738.7-201ENST00000609744 511 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMP2AO43633 AL033527.5-202ENST00000641632 1098 ntBASIC18.03■□□□□ 0.48
CHMP2AO43633 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP2AO43633 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms