Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.11□□□□□ -0.47
SNAI2O43623 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 AC092329.2-201ENST00000598402 547 ntBASIC12.11□□□□□ -0.47
SNAI2O43623 AL139424.1-201ENST00000607572 797 ntBASIC12.11□□□□□ -0.47
SNAI2O43623 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.11□□□□□ -0.47
SNAI2O43623 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.11□□□□□ -0.47
SNAI2O43623 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SNAI2O43623 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 AC005332.1-201ENST00000577698 1310 ntBASIC12.11□□□□□ -0.47
SNAI2O43623 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNAI2O43623 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SNAI2O43623 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SNAI2O43623 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.1□□□□□ -0.47
SNAI2O43623 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.1□□□□□ -0.47
SNAI2O43623 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.1□□□□□ -0.47
SNAI2O43623 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.1□□□□□ -0.47
SNAI2O43623 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 CYP2A7P1-201ENST00000595391 815 ntBASIC12.1□□□□□ -0.47
SNAI2O43623 AC020765.3-201ENST00000613051 740 ntBASIC12.1□□□□□ -0.47
SNAI2O43623 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 AF228730.7-201ENST00000641842 219 ntBASIC12.1□□□□□ -0.47
SNAI2O43623 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SNAI2O43623 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SNAI2O43623 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms