Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
MID1O15344 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MID1O15344 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.04■□□□□ 0.16
MID1O15344 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MID1O15344 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 OR8S1-201ENST00000310194 1080 ntBASIC16.04■□□□□ 0.16
MID1O15344 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.04■□□□□ 0.16
MID1O15344 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.04■□□□□ 0.16
MID1O15344 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 ELK1P1-201ENST00000485699 580 ntBASIC16.04■□□□□ 0.16
MID1O15344 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.04■□□□□ 0.16
MID1O15344 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.04■□□□□ 0.16
MID1O15344 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.04■□□□□ 0.16
MID1O15344 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MID1O15344 CTBP2P3-201ENST00000585629 1255 ntBASIC16.04■□□□□ 0.16
MID1O15344 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 AC093726.1-201ENST00000608064 963 ntBASIC16.04■□□□□ 0.16
MID1O15344 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
MID1O15344 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.04■□□□□ 0.16
MID1O15344 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MID1O15344 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.04■□□□□ 0.16
MID1O15344 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
MID1O15344 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.03■□□□□ 0.16
MID1O15344 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MID1O15344 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MID1O15344 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MID1O15344 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MID1O15344 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 AL512384.1-201ENST00000406683 331 ntBASIC16.03■□□□□ 0.16
MID1O15344 GIMAP3P-201ENST00000495150 836 ntBASIC16.03■□□□□ 0.16
MID1O15344 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.03■□□□□ 0.16
MID1O15344 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MID1O15344 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.03■□□□□ 0.16
MID1O15344 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.03■□□□□ 0.16
MID1O15344 AC132938.2-201ENST00000579188 680 ntBASIC16.03■□□□□ 0.16
MID1O15344 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MID1O15344 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MID1O15344 AL591163.1-201ENST00000641757 987 ntBASIC16.03■□□□□ 0.16
MID1O15344 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.03■□□□□ 0.16
MID1O15344 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MID1O15344 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MID1O15344 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MID1O15344 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
MID1O15344 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MID1O15344 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MID1O15344 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MID1O15344 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MID1O15344 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MID1O15344 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MID1O15344 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MID1O15344 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
MID1O15344 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MID1O15344 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MID1O15344 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MID1O15344 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms