Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC25.24■■□□□ 1.63
CHD1O14646 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC25.24■■□□□ 1.63
CHD1O14646 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC25.24■■□□□ 1.63
CHD1O14646 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC25.24■■□□□ 1.63
CHD1O14646 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC25.24■■□□□ 1.63
CHD1O14646 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 EML3-217ENST00000531557 2509 ntTSL 5 BASIC25.24■■□□□ 1.63
CHD1O14646 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CHD1O14646 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CHD1O14646 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CHD1O14646 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CHD1O14646 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 STUB1-204ENST00000564370 875 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 MIR4649-201ENST00000582839 64 ntBASIC25.23■■□□□ 1.63
CHD1O14646 AC005324.6-201ENST00000587972 613 ntBASIC25.23■■□□□ 1.63
CHD1O14646 MIR6842-201ENST00000612539 65 ntBASIC25.23■■□□□ 1.63
CHD1O14646 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CHD1O14646 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 RCC2P8-201ENST00000502779 1035 ntBASIC25.23■■□□□ 1.63
CHD1O14646 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC25.23■■□□□ 1.63
CHD1O14646 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD1O14646 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC25.23■■□□□ 1.63
CHD1O14646 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC25.22■■□□□ 1.63
CHD1O14646 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD1O14646 CAP2P1-201ENST00000557743 1390 ntBASIC25.22■■□□□ 1.63
CHD1O14646 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD1O14646 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD1O14646 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD1O14646 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CHD1O14646 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD1O14646 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CHD1O14646 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC25.21■■□□□ 1.63
CHD1O14646 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 AL139094.1-201ENST00000405549 1188 ntBASIC25.21■■□□□ 1.63
CHD1O14646 RPS9P1-201ENST00000419943 583 ntBASIC25.21■■□□□ 1.63
CHD1O14646 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 AC026410.1-201ENST00000507366 1101 ntBASIC25.21■■□□□ 1.63
CHD1O14646 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC25.21■■□□□ 1.63
CHD1O14646 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD1O14646 FST-202ENST00000396947 2538 ntTSL 5 BASIC25.21■■□□□ 1.63
CHD1O14646 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CHD1O14646 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC25.21■■□□□ 1.63
CHD1O14646 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHD1O14646 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC25.21■■□□□ 1.63
CHD1O14646 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC25.21■■□□□ 1.63
CHD1O14646 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC25.2■■□□□ 1.63
CHD1O14646 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
CHD1O14646 AC114812.1-204ENST00000449669 728 ntBASIC25.2■■□□□ 1.63
CHD1O14646 AC021723.1-201ENST00000486306 515 ntBASIC25.2■■□□□ 1.63
CHD1O14646 RN7SL67P-201ENST00000492147 296 ntBASIC25.2■■□□□ 1.63
CHD1O14646 AC009779.1-201ENST00000551138 283 ntBASIC25.2■■□□□ 1.63
CHD1O14646 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC25.2■■□□□ 1.63
CHD1O14646 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC25.2■■□□□ 1.63
CHD1O14646 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
CHD1O14646 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.63
CHD1O14646 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD1O14646 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms