Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK1AO00322 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK1AO00322 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UPK1AO00322 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK1AO00322 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK1AO00322 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
UPK1AO00322 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.24■□□□□ 0.03
UPK1AO00322 AC073389.1-201ENST00000595595 795 ntBASIC15.24■□□□□ 0.03
UPK1AO00322 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK1AO00322 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
UPK1AO00322 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UPK1AO00322 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK1AO00322 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UPK1AO00322 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1AO00322 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.23■□□□□ 0.03
UPK1AO00322 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
UPK1AO00322 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UPK1AO00322 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1AO00322 MKNK2P1-201ENST00000437526 628 ntBASIC15.23■□□□□ 0.03
UPK1AO00322 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1AO00322 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.23■□□□□ 0.03
UPK1AO00322 AC243562.1-201ENST00000560672 389 ntBASIC15.23■□□□□ 0.03
UPK1AO00322 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.23■□□□□ 0.03
UPK1AO00322 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.23■□□□□ 0.03
UPK1AO00322 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.23■□□□□ 0.03
UPK1AO00322 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1AO00322 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 AC023908.3-201ENST00000564211 3047 ntBASIC15.23■□□□□ 0.03
UPK1AO00322 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
UPK1AO00322 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1AO00322 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UPK1AO00322 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1AO00322 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms