Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 PIN1P1-201ENST00000412108 996 ntBASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 AC027307.3-201ENST00000594262 1100 ntBASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 NORAD-201ENST00000565493 5339 ntBASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NPIPA3F8WFD2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NPIPA3F8WFD2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 CRB3P1-201ENST00000449338 276 ntBASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 AL133215.2-201ENST00000609242 977 ntBASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 AC012645.4-201ENST00000610691 1061 ntBASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA3F8WFD2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms