Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 AC073439.1-201ENST00000624121 1774 ntBASIC14.42□□□□□ -0.1
TVP23AA6NH52 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.42□□□□□ -0.1
TVP23AA6NH52 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TVP23AA6NH52 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 AC140658.5-201ENST00000438532 169 ntBASIC14.41□□□□□ -0.1
TVP23AA6NH52 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 AC064836.3-201ENST00000607928 673 ntBASIC14.41□□□□□ -0.1
TVP23AA6NH52 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.41□□□□□ -0.1
TVP23AA6NH52 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 AC013268.4-201ENST00000637413 2228 ntBASIC14.41□□□□□ -0.1
TVP23AA6NH52 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TVP23AA6NH52 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TVP23AA6NH52 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TVP23AA6NH52 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TVP23AA6NH52 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TVP23AA6NH52 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TVP23AA6NH52 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TVP23AA6NH52 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TVP23AA6NH52 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 KRT18P2-201ENST00000447938 1258 ntBASIC14.4□□□□□ -0.1
TVP23AA6NH52 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.4□□□□□ -0.1
TVP23AA6NH52 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.4□□□□□ -0.1
TVP23AA6NH52 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms