Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TFAMP1-201ENST00000412727 736 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 AC004832.2-201ENST00000426397 482 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 RN7SL589P-201ENST00000481268 310 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 AC098859.1-201ENST00000502915 1238 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 AL135744.1-201ENST00000565098 629 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 AC099063.4-201ENST00000641099 1602 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 ACTG1P14-201ENST00000446382 1122 ntBASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 PGAM5P1-201ENST00000518923 814 ntBASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AC008267.7-201ENST00000624570 1194 ntBASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AC092902.6-201ENST00000641783 218 ntBASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 AC013268.4-201ENST00000637413 2228 ntBASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA11Q9Y5H2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AC008677.1-201ENST00000519230 1561 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AP005117.1-202ENST00000581724 1908 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AL138918.1-201ENST00000568306 659 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AC024267.1-201ENST00000582320 895 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 MTDHP5-201ENST00000598980 586 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 SPTSSB-204ENST00000617024 1292 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 C20orf181-201ENST00000623918 480 ntBASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA11Q9Y5H2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms