Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB7Q9Y5E2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB7Q9Y5E2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB7Q9Y5E2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB7Q9Y5E2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB7Q9Y5E2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 PHKG1P2-201ENST00000457537 863 ntBASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 RPL13AP25-201ENST00000484130 612 ntBASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 ENPP7P5-201ENST00000541031 1031 ntBASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 AL033527.4-201ENST00000641026 673 ntBASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB7Q9Y5E2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AP001282.1-201ENST00000531301 1499 ntBASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AC134915.1-201ENST00000426461 574 ntBASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 MIR5189-201ENST00000577370 114 ntBASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AL022328.1-201ENST00000610050 478 ntBASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHB7Q9Y5E2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 AC012313.1-201ENST00000593393 3059 ntBASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms