Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 AC026150.2-201ENST00000564693 1156 ntBASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 AC026979.3-201ENST00000607315 403 ntBASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 AC018529.1-201ENST00000613063 361 ntBASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 BNIP3P1-202ENST00000550043 1585 ntBASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 AL353705.2-201ENST00000428243 662 ntBASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 AL691403.2-201ENST00000618460 490 ntBASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AP4E1Q9UPM8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 CYP4F24P-201ENST00000586049 1580 ntBASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 AC003101.2-201ENST00000612557 442 ntBASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4E1Q9UPM8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4E1Q9UPM8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms