Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CNN2P2-201ENST00000443536 909 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 CNN2P3-201ENST00000450201 906 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 HNRNPUP1-201ENST00000554987 333 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 AC097359.3-201ENST00000603982 1210 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 AL136317.3-201ENST00000618497 906 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.91■□□□□ 0.3
PCDHGC3Q9UN70 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 AC006538.3-201ENST00000612495 578 ntBASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 TUBB3P1-201ENST00000405796 1332 ntBASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC3Q9UN70 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PCDHGC3Q9UN70 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.89■□□□□ 0.3
PCDHGC3Q9UN70 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGC3Q9UN70 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGC3Q9UN70 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 CICP6-201ENST00000457191 2729 ntBASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 AC136604.1-201ENST00000418535 575 ntBASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 AL080243.2-201ENST00000418783 582 ntBASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 AC004449.1-201ENST00000564240 433 ntBASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 AC051619.7-201ENST00000568314 623 ntBASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 AL589739.1-201ENST00000607720 493 ntBASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGC3Q9UN70 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms