Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
LINC00474Q9P2X8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
LINC00474Q9P2X8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 PCDHA3-202ENST00000532566 4594 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AC078925.2-201ENST00000624013 1973 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 GGT3P-204ENST00000453783 1664 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 YBX2P1-201ENST00000394192 760 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 BX842568.4-201ENST00000421222 227 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 KRT18P2-201ENST00000447938 1258 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 POLD2P1-201ENST00000511220 997 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AC005829.1-201ENST00000570002 483 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AP002472.1-201ENST00000577490 586 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AL078644.1-201ENST00000609881 752 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AC079781.4-201ENST00000641908 219 ntBASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC00474Q9P2X8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 AL031731.1-201ENST00000642131 2094 ntBASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 FAM58CP-201ENST00000435741 640 ntBASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms