Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL20A1Q9P218 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.03■□□□□ 0.48
COL20A1Q9P218 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 AC090340.1-201ENST00000620778 4980 ntBASIC18.02■□□□□ 0.48
COL20A1Q9P218 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 AC079776.1-201ENST00000401540 1152 ntBASIC18.02■□□□□ 0.48
COL20A1Q9P218 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 AC069224.1-201ENST00000566372 1715 ntBASIC18.02■□□□□ 0.48
COL20A1Q9P218 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.02■□□□□ 0.48
COL20A1Q9P218 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL20A1Q9P218 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL20A1Q9P218 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL20A1Q9P218 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL20A1Q9P218 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.02■□□□□ 0.47
COL20A1Q9P218 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
COL20A1Q9P218 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.02■□□□□ 0.47
COL20A1Q9P218 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.02■□□□□ 0.47
COL20A1Q9P218 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL20A1Q9P218 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL20A1Q9P218 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL20A1Q9P218 AC011477.6-201ENST00000604980 1927 ntBASIC18.02■□□□□ 0.47
COL20A1Q9P218 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC084018.2-201ENST00000613093 2607 ntBASIC18.01■□□□□ 0.47
COL20A1Q9P218 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC244107.1-201ENST00000442033 332 ntBASIC18.01■□□□□ 0.47
COL20A1Q9P218 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC011495.1-201ENST00000498085 584 ntBASIC18.01■□□□□ 0.47
COL20A1Q9P218 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 AC036164.1-201ENST00000570544 333 ntBASIC18.01■□□□□ 0.47
COL20A1Q9P218 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.01■□□□□ 0.47
COL20A1Q9P218 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL20A1Q9P218 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18■□□□□ 0.47
COL20A1Q9P218 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL20A1Q9P218 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
COL20A1Q9P218 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL20A1Q9P218 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18■□□□□ 0.47
COL20A1Q9P218 ARSEP1-201ENST00000420443 635 ntBASIC18■□□□□ 0.47
COL20A1Q9P218 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms