Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 AC018529.1-201ENST00000613063 361 ntBASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 MIR6080-201ENST00000617359 66 ntBASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
CUEDC1Q9NWM3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CUEDC1Q9NWM3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CUEDC1Q9NWM3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.58■□□□□ 0.09
CUEDC1Q9NWM3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
CUEDC1Q9NWM3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CUEDC1Q9NWM3 AC008677.1-201ENST00000519230 1561 ntBASIC15.58■□□□□ 0.09
CUEDC1Q9NWM3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 AC008741.2-201ENST00000612792 3115 ntBASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 MIR648-201ENST00000385046 94 ntBASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 AC003101.2-201ENST00000612557 442 ntBASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 AL603832.2-201ENST00000566195 2125 ntBASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 AC010491.1-201ENST00000563101 2797 ntBASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CUEDC1Q9NWM3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms