Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 AC073592.5-201ENST00000624854 528 ntBASIC19.19■□□□□ 0.66
RNF216Q9NWF9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 AP002414.3-201ENST00000589352 1468 ntBASIC19.19■□□□□ 0.66
RNF216Q9NWF9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 KRT8P47-201ENST00000604727 1398 ntBASIC19.19■□□□□ 0.66
RNF216Q9NWF9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF216Q9NWF9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 TMA16P2-201ENST00000413187 601 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC004832.2-201ENST00000426397 482 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 SETP4-201ENST00000455717 868 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC092183.1-201ENST00000469884 875 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 RN7SKP265-201ENST00000516448 223 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 MTDHP5-201ENST00000598980 586 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC139795.3-201ENST00000606358 541 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC017083.3-201ENST00000609955 700 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC051619.9-201ENST00000623237 597 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 LINC02211-204ENST00000642024 1070 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 AC092850.2-201ENST00000623821 2697 ntBASIC19.18■□□□□ 0.66
RNF216Q9NWF9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 ZCCHC9-202ENST00000380199 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF216Q9NWF9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AL512635.1-201ENST00000414056 832 ntBASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 OR6C71P-201ENST00000432580 913 ntBASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC009947.1-201ENST00000444350 727 ntBASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC067805.1-201ENST00000559344 470 ntBASIC19.17■□□□□ 0.66
RNF216Q9NWF9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms