Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AC096734.2-201ENST00000562054 433 ntBASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AC007064.4-201ENST00000637740 555 ntBASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 AC005622.1-201ENST00000636801 1703 ntBASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 MIR574-201ENST00000385209 96 ntBASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.44□□□□□ -0.26
LIN7CQ9NUP9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 IGLL3P-201ENST00000412472 434 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms