Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC004449.1-201ENST00000564240 433 ntBASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 KRT18P28-201ENST00000453838 1332 ntBASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 METTL21AP1-201ENST00000438852 635 ntBASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 AC025678.2-201ENST00000562061 970 ntBASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SPDYE12P-201ENST00000618416 771 ntBASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
BLOC1S4Q9NUP1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC092127.1-201ENST00000567093 3455 ntBASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CNN2P2-201ENST00000443536 909 ntBASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CNN2P3-201ENST00000450201 906 ntBASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AL589739.1-201ENST00000607720 493 ntBASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AL136317.3-201ENST00000618497 906 ntBASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 AC009090.5-201ENST00000624886 2285 ntBASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
BLOC1S4Q9NUP1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms