Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 FO681548.1-201ENST00000455617 1132 ntBASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AL139099.5-201ENST00000635274 300 ntBASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 BNIP3P1-202ENST00000550043 1585 ntBASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 FAM21FP-201ENST00000426241 1131 ntBASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AL162726.2-201ENST00000438986 1017 ntBASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 GOLGA2P4-201ENST00000441462 777 ntBASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AL022328.1-201ENST00000610050 478 ntBASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 KRT8P22-201ENST00000562317 1415 ntBASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM7Q9NR12 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 MIR648-201ENST00000385046 94 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms