Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NEUROD4Q9HD90 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PRAL-201ENST00000624952 3286 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AL355306.1-201ENST00000415580 579 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AC211486.1-202ENST00000416371 468 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AC211476.1-201ENST00000503899 468 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 FAM86C2P-203ENST00000528684 1004 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AC024267.1-201ENST00000582320 895 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AC063926.3-201ENST00000624734 5658 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 AL139384.1-201ENST00000612143 3047 ntBASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEUROD4Q9HD90 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 AC091812.2-201ENST00000619081 385 ntBASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEUROD4Q9HD90 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms