Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 LINC02199-201ENST00000506655 2702 ntBASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF3Q9HD45 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
TM9SF3Q9HD45 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 PCDHA1-201ENST00000378133 2726 ntBASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 SDHAP3-202ENST00000515467 728 ntBASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 WASH4P-201ENST00000564273 1246 ntBASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF3Q9HD45 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 FER1L4-210ENST00000615531 5998 ntBASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AL512384.1-201ENST00000406683 331 ntBASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 IGHV3-71-201ENST00000523324 359 ntBASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 SRD5A3P1-201ENST00000603021 949 ntBASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AC007431.3-201ENST00000623221 587 ntBASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 SLC7A15P-201ENST00000424028 1363 ntBASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF3Q9HD45 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 AL513523.2-202ENST00000427283 2040 ntBASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 GGT4P-201ENST00000623672 1708 ntBASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF3Q9HD45 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms