Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ACA64.2-201ENST00000459014 129 ntBASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 GIMAP3P-201ENST00000495150 836 ntBASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AP006294.1-201ENST00000415407 339 ntBASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 HILS1-202ENST00000545329 423 ntBASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 NME2P1-201ENST00000426182 414 ntBASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 AL158212.4-201ENST00000624062 1286 ntBASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 AL358472.5-202ENST00000641448 1267 ntBASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 AC007541.1-201ENST00000570282 1469 ntBASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
KIAA1549Q9HCM3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 ELK1P1-201ENST00000485699 580 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC123567.1-201ENST00000548294 1261 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC074044.1-201ENST00000609673 707 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC011270.2-201ENST00000624293 2550 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC138969.3-201ENST00000546612 1459 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC138932.2-201ENST00000548268 1459 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC126755.4-201ENST00000549796 1459 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms