Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZACNP1-201ENST00000612259 710 ntBASIC14.62□□□□□ -0.07
CHD8Q9HCK8 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC068587.8-201ENST00000641239 219 ntBASIC14.62□□□□□ -0.07
CHD8Q9HCK8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 PSMD4P1-201ENST00000433951 1109 ntBASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AL031713.1-201ENST00000564813 661 ntBASIC14.61□□□□□ -0.07
CHD8Q9HCK8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC130709.1-201ENST00000484779 1212 ntBASIC14.61□□□□□ -0.07
CHD8Q9HCK8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC004686.1-201ENST00000605113 538 ntBASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHD8Q9HCK8 AC116353.5-201ENST00000638148 1699 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AL354751.1-201ENST00000412768 1863 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 RN7SL713P-201ENST00000582127 302 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AC092053.1-201ENST00000605787 1936 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 COX20P1-201ENST00000366529 357 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 RN7SL846P-201ENST00000467429 292 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 MIR5196-201ENST00000578146 115 ntBASIC14.6□□□□□ -0.07
CHD8Q9HCK8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHD8Q9HCK8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHD8Q9HCK8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms