Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 MTX1P1-201ENST00000440904 838 ntBASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 GAPDHP40-201ENST00000505218 1006 ntBASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 AC093813.1-201ENST00000605066 256 ntBASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC6CQ9HCJ0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 AC011676.5-201ENST00000624864 2660 ntBASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.44■□□□□ 0.7
TNRC6CQ9HCJ0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 ACTBP8-201ENST00000403258 1108 ntBASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 Z93015.1-201ENST00000451718 390 ntBASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC6CQ9HCJ0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 AC005332.8-201ENST00000622750 2735 ntBASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 AKR7A2P1-201ENST00000460134 915 ntBASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 AC020914.3-201ENST00000594712 304 ntBASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 ECM1P1-201ENST00000604092 1279 ntBASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.42■□□□□ 0.7
TNRC6CQ9HCJ0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms