Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 AP002414.2-201ENST00000591780 3365 ntBASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CLK4Q9HAZ1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 AL671277.1-201ENST00000429656 993 ntBASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 KRT18P34-201ENST00000488218 1270 ntBASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 AC092919.2-201ENST00000623631 1645 ntBASIC15.72■□□□□ 0.11
CLK4Q9HAZ1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 AL355306.1-201ENST00000415580 579 ntBASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 AC099522.2-201ENST00000607001 744 ntBASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLK4Q9HAZ1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms