Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 AC061975.2-201ENST00000581722 295 ntBASIC18.72■□□□□ 0.59
EFCC1Q9HA90 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 AC233724.13-201ENST00000598383 410 ntBASIC18.72■□□□□ 0.59
EFCC1Q9HA90 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.72■□□□□ 0.59
EFCC1Q9HA90 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 AL589702.1-201ENST00000641229 1509 ntBASIC18.72■□□□□ 0.59
EFCC1Q9HA90 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFCC1Q9HA90 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 GOLGA2P4-201ENST00000441462 777 ntBASIC18.71■□□□□ 0.59
EFCC1Q9HA90 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 AC104596.2-201ENST00000512793 793 ntBASIC18.71■□□□□ 0.59
EFCC1Q9HA90 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 MIR6069-201ENST00000620069 79 ntBASIC18.71■□□□□ 0.59
EFCC1Q9HA90 PP12613-201ENST00000424958 2230 ntBASIC18.71■□□□□ 0.59
EFCC1Q9HA90 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 CDC14C-201ENST00000428251 1719 ntBASIC18.71■□□□□ 0.59
EFCC1Q9HA90 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EFCC1Q9HA90 CLK3P2-201ENST00000427566 1453 ntBASIC18.71■□□□□ 0.59
EFCC1Q9HA90 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
EFCC1Q9HA90 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.58
EFCC1Q9HA90 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 DOC2GP-204ENST00000639052 2548 ntBASIC18.7■□□□□ 0.58
EFCC1Q9HA90 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 AL391256.1-201ENST00000443260 1855 ntBASIC18.7■□□□□ 0.58
EFCC1Q9HA90 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 RNA5SP412-201ENST00000516234 123 ntBASIC18.7■□□□□ 0.58
EFCC1Q9HA90 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.7■□□□□ 0.58
EFCC1Q9HA90 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms